*Arora, B., B. P. Mohanty, and J. T. McGuire (2011), Uncertainty in dual permeability model parameters for structured soils, Water Resources Research, 48, W01524, doi: 10.1029/2011WR010500
*Hansen, D.J., McGuire, J.T., and Mohanty, B.M. (2011) Enhanced biogeochemical cycling and subsequent reduction of hydraulic conductivity associated with soil-layer interfaces in the vadose zone. Journal of Environmental Quality, 40 (6), 1941-1954, doi:10.2134/jeq2011.0112 Posted online 5 Oct. 2011
*Arora, B., B. P. Mohanty, and J. T. McGuire (2011), Inverse Estimation of Parameters for Multi-Domain Flow Models with Different Macropore Densities, Water Resources Research, 47, W04512, doi:10.1029/2010WR009451. (Note: This publication was a featured article in EOS, Transactions of the American Geophysical Union)
*Kneeshaw, T.A., McGuire, J.T., Cozzarelli, I.M., & Smith, E.W. (2011) Quantifying In Situ Rates of Sulfate Reduction in Response to Geochemical Perturbations. Ground Water, p. 1-11. doi: 10.1111/j.1745-6584.2010.00782.x
Phanikumar, M.S. and McGuire, J.T., (2010) A multi-species reactive transport model to estimate biogeochemical rates based on single-well, push-pull test data, Computers & Geosciences, 36, 997-1004
*Baez-Cazull, S.E., McGuire, J.T., Cozzarelli I.M., and Voytek, M.A. (2008) Determination of dominant biogeochemical processes in a contaminated aquifer-wetland system using multivariate statistical analyses. Journal of Environmental Quality 37(1), 30-46.
*Kneeshaw, T.A. McGuire, J.T., Cazull, S.E.B., Smith, E.W., Cozzarelli, I.M. (2007) Evaluation of sulfate reduction at experimentally induced mixing interfaces using small-scale push-pull tests in an aquifer-wetland system. Applied Geochemistry, special issue on Biogeochemical Gradients, 22, 2618-2629.
* Baez-Cazull, S.E., McGuire, J.T., Cozzarelli, I.M., Raymond. A. and Welsh, L., (2007) Centimeter-scale characterization of biogeochemical gradients at a wetland-aquifer interface using capillary electrophoresis. Applied Geochemistry, special issue on Biogeochemical Gradients, 22, 2664-2683.
Velbel, M.A., McGuire, J.T., and Madden, A.J., 2007, Scanning electron microscopy of garnet from southern Michigan soils: Etching rates and inheritance of pre-glacial and pre-pedogenic grain-surface textures. Chapter 15, Developments in Sedimentology, Volume 58; Heavy Minerals in Use, edited by Maria A. Mange and David T. Wright
McGuire, J.T., Long, D.T., Hyndman, D.W., 2004, Analysis of recharge induced geochemical change in a contaminated aquifer. Ground Water, 43(4), 518-530.
Phanikumar, M. S., and McGuire, J.T. 2004, A 3D partial-equilibrium model to simulate coupled hydrogeological, microbiological, and geochemical processes in subsurface systems. Geophysical Research Letters 31 (LII503):1-4.
Haack, S.K., Fogarty, L.R., West, T.G., Alm, E.W., McGuire, J.T., Long, D.T., Hyndman, D.W., Forney, L.J., 2004, Changes in microbial community structure over spatial and temporal chemical gradients in a contaminated aquifer, Environmental Microbiology, 6(5), 438-448.
McGuire, J. T., Long, D.T., Klug, M.J., Haack, S.K., and Hyndman, D.W., 2002, Evaluating the behavior of oxygen, nitrate, and sulfate during recharge and quantifying reduction rates in a contaminated aquifer, Environmental Science and Technology, 36, 2693-2700.
McGuire, J. T., Smith, E. W., Long, D. T., Hyndman, D. W., Haack, S. K., Klug, M. J., and Velbel, M. A., 2000, Temporal variations in parameters reflecting terminal-electron-accepting processes in an aquifer contaminated with waste fuel and chlorinated solvents, in K. Konhauser and G. Southam (eds.), Geomicrobiology - Technical Session 06, 110th Geological Society of America Annual Meeting. Chemical Geology, 169:471-485. (Invited paper)
McGuire, J.T., Smith, E.W., Long, D.T., Hyndman, D.W., Haack, S.K., Kolak, J.J., Klug, M.J., Velbel, M.A., and Forney, L.J., 1999, Temporal variations in biogeochemical processes that influence ground water redox zonation. In Morganwalp, D.W., and Buxton, H.T., eds., U.S. Geological Survey Toxic Substances Hydrology Program--Proceedings of the Technical Meeting, Charleston, South Carolina, March 8-12, 1999, USGS Water-Resources Investigations Report 99-4018C, 641-652.